R.M. Saecker: search on Z-Library

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1

Thermodynamic analysis of interactions between denaturants and protein surface exposed on unfolding: Interpretation of urea and guanidinium chloride m-values and their correlation with changes in accessible surface area (ASA) using preferential interaction coefficients and the local-bulk domain model

E.S. Courtenay, M.W. Capp, R.M. Saecker, M.T. Record Jr.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2000

Language:

english

File:

PDF, 196 KB

english, 2000

2

A Comparison of Taped Problems With and Without a Brief Post-Treatment Assessment on Multiplication Fluency

Stacy L. Bliss, Christopher H. Skinner, Elizabeth McCallum, Lee B. Saecker, Emily Rowland-Bryant, Katie S. Brown

Journal:

Journal of Behavioral Education

Year:

2010

Language:

english

File:

PDF, 233 KB

english, 2010

3

Mechanism of Bacterial Transcription Initiation: RNA Polymerase - Promoter Binding, Isomerization to Initiation-Competent Open Complexes, and Initiation of RNA Synthesis

Ruth M. Saecker, M. Thomas Record Jr., Pieter L. deHaseth

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 894 KB

english, 2011

4

NLRP3 is activated in Alzheimer’s disease and contributes to pathology in APP/PS1 mice

Heneka, Michael T., Kummer, Markus P., Stutz, Andrea, Delekate, Andrea, Schwartz, Stephanie, Vieira-Saecker, Ana, Griep, Angelika, Axt, Daisy, Remus, Anita, Tzeng, Te-Chen, Gelpi, Ellen, Halle, Annett

Journal:

Year:

2012

Language:

english

File:

PDF, 1.55 MB

english, 2012

5

Soap Films and the Joy of Bubbles

Saecker, Mary E.

Journal:

Journal of Chemical Education

Year:

2005

Language:

english

File:

PDF, 471 KB

english, 2005

6

Chemistry Sudoku Puzzle

Journal:

Journal of Chemical Education

Year:

2007

Language:

english

File:

PDF, 444 KB

english, 2007

7

A Comparison of Taped Problems With and Without a Brief Post-Treatment Assessment on Multiplication Fluency

Stacy L. Bliss, Christopher H. Skinner, Elizabeth McCallum, Lee B. Saecker, Emily Rowland-Bryant and Katie S. Brown

Journal:

Journal of Behavioral Education

Year:

2010

Language:

english

File:

PDF, 1.14 MB

english, 2010

8

Preferential Interactions of Glycine Betaine and of Urea with DNA: Implications for DNA Hydration and for Effects of These Solutes on DNA Stability †

Hong, Jiang, Capp, Michael W., Anderson, Charles F., Saecker, Ruth M., Felitsky, Daniel J., Anderson, Melissa W., Record, M. Thomas

Journal:

Year:

2004

Language:

english

File:

PDF, 193 KB

english, 2004

9

Increased susceptibility to sporadic Parkinson's disease by a certain combined α-synuclein/apolipoprotein E genotype

Rejko Krüger, Ana Maria Menezes Vieira-Saecker, Wilfried Kuhn, Daniela Berg, Thomas Müller, Natalia Kühnl, Gerd A. Fuchs, Alexander Storch, Marcel Hungs, Dirk Woitalla, Horst Przuntek, Jörg T. Epplen,

Journal:

Annals of Neurology

Year:

1999

Language:

english

File:

PDF, 146 KB

english, 1999

10

Descriptions of personal experiences: Effects on students' learning and behavioral intentions toward peers with Attention-Deficit/Hyperactivity Disorder

Lee B. Saecker, Amy L. Skinner, Christopher H. Skinner, Emily Rowland, Emily Kirk

Journal:

Psychology in the Schools

Year:

2010

Language:

english

File:

PDF, 98 KB

english, 2010

11

Polymorphisms of the α-synuclein promoter: expression analyses and association studies in Parkinson's disease

C. Holzmann, R. Krüger, A. M. M. Vieira Saecker, I. Schmitt, L. Schöls, K. Berger, O. Riess

Journal:

Journal of Neural Transmission

Year:

2003

Language:

english

File:

PDF, 201 KB

english, 2003

12

SCA2trinucleotide expansion in German SCA patients

Olaf Riess, Franco A. Laccone, Suzana Gispert, Ludger Schöls, Christine Zühlke, Ana Maria Menezes Vieira-Saecker, Susanne Herlt, Karl Wessel, Jörg T. Epplen, Bernhard H.F. Weber, Friedmar Kreuz, Sohey

Journal:

Year:

1997

Language:

english

File:

PDF, 102 KB

english, 1997

13

Protein surface salt bridges and paths for DNA wrapping

Ruth M Saecker, M.Thomas Record Jr

Journal:

Current Opinion in Structural Biology

Year:

2002

Language:

english

File:

PDF, 1.01 MB

english, 2002

14

The Association of CD18 Alleles with Anti-myeloperoxidase Subtypes of ANCA-Associated Systemic Vasculitides

Martin Gencik, Stephan Meller, Stefan Borgmann, Thomas Sitter, Ana Maria Menezes Saecker, Harald Fricke, Jörg T. Epplen

Journal:

Clinical Immunology

Year:

2000

Language:

english

File:

PDF, 70 KB

english, 2000

15

Compensating Effects of Opposing Changes in Putrescine (2+) and K+Concentrations onlacRepressor-lacOperator Binding:in VitroThermodynamic Analysis andin VivoRelevance

Michael W. Capp, Scott D. Cayley, Wentao Zhang, Harry J. Guttman, Sonya E. Melcher, Ruth M. Saecker, Charles F. Anderson, Thomas M. Record, Jr

Journal:

Journal of Molecular Biology

Year:

1996

Language:

english

File:

PDF, 514 KB

english, 1996

16

Cooperative and Anticooperative Effects in Binding of the First and Second Plasmid OsymOperators to a LacI Tetramer: Evidence for Contributions of Non-operator DNA Binding by Wrapping and Looping

Mark M. Levandoski, Oleg V. Tsodikov, Diane E. Frank, Sonya E. Melcher, Ruth M. Saecker, Thomas M. Record Jr

Journal:

Journal of Molecular Biology

Year:

1996

Language:

english

File:

PDF, 624 KB

english, 1996

17

Thermodynamics of the interactions of Lac repressor with variants of the symmetric Lac operator: effects of converting a consensus site to a non-specific site

Diane E. Frank, Ruth M. Saecker, Jeffrey P. Bond, Michael W. Capp, Oleg V. Tsodikov, Sonya E. Melcher, Mark M. Levandoski, M.Thomas Record Jr

Journal:

Journal of Molecular Biology

Year:

1997

Language:

english

File:

PDF, 510 KB

english, 1997

18

Quantitative analysis of multiple-hit footprinting studies to characterize DNA conformational changes in protein-DNA complexes: application to DNA opening by Eσ70 RNA polymerase

Oleg V. Tsodikov, Maria L. Craig, Ruth M. Saecker, M.Thomas Record Jr

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 385 KB

english, 1998

19

DNA footprints of the two kinetically significant intermediates in formation of an RNA polymerase-promoter open complex: evidence that interactions with start site and downstream DNA induce sequential conformational changes in polymerase and DNA

Maria L. Craig, Oleg V. Tsodikov, Kristi L. McQuade, Peter E. Schlax Jr, Michael W. Capp, Ruth M. Saecker, M.Thomas Record Jr

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 494 KB

english, 1998

20

Wrapping of flanking non-operator DNA in lac repressor-operator complexes: implications for DNA looping

Oleg V. Tsodikov, Ruth M. Saecker, Sonya E. Melcher, Mark M. Levandoski, Diane E. Frank, Michael W. Capp, M.Thomas Record Jr

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 420 KB

english, 1999

21

Specific and non-specific interactions of integration host factor with DNA: thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding

Jill A. Holbrook, Oleg V. Tsodikov, Ruth M. Saecker, M.Thomas Record Jr

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 600 KB

english, 2001

22

Do Sigma Factors Need Help with a Meltdown?

Ruth M. Saecker, Caroline A. Davis, M.T. Record Jr.

Journal:

Year:

2006

Language:

english

File:

PDF, 265 KB

english, 2006

23

Formation of a Wrapped DNA–Protein Interface: Experimental Characterization and Analysis of the Large Contributions of Ions and Water to the Thermodynamics of Binding IHF to H′ DNA

Kirk A. Vander Meulen, Ruth M. Saecker, M. Thomas Record Jr

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.60 MB

english, 2008

24

Late Steps in the Formation of E. coli RNA Polymerase—λPR Promoter Open Complexes: Characterization of Conformational Changes by Rapid [Perturbant] Upshift Experiments

Wayne S. Kontur, Ruth M. Saecker, Michael W. Capp, M. Thomas Record Jr

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 331 KB

english, 2008

25

DNA Binding Mode Transitions of Escherichia coli HUαβ: Evidence for Formation of a Bent DNA — Protein Complex on Intact, Linear Duplex DNA

Junseock Koh, Ruth M. Saecker, M. Thomas Record Jr

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.26 MB

english, 2008

26

Evidence for a Tyrosine–Adenine Stacking Interaction and for a Short-lived Open Intermediate Subsequent to Initial Binding of Escherichia coli RNA Polymerase to Promoter DNA

Lisa A. Schroeder, Theodore J. Gries, Ruth M. Saecker, M. Thomas Record Jr, Michael E. Harris, Pieter L. deHaseth

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 678 KB

english, 2009

27

Nonspecific DNA Binding and Bending by HUαβ: Interfaces of the Three Binding Modes Characterized by Salt-Dependent Thermodynamics

Junseock Koh, Irina Shkel, Ruth M. Saecker, M. Thomas Record Jr.

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.11 MB

english, 2011

28

Kinetic Studies and Structural Models of the Association of E. coli σ70 RNA Polymerase with the λPR Promoter: Large Scale Conformational Changes in Forming the Kinetically Significant Intermediates

Ruth M Saecker, Oleg V Tsodikov, Kristi L McQuade, Peter E Schlax Jr, Michael W Capp, M Thomas Record Jr

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 580 KB

english, 2002

29

Mrp14 Deficiency Ameliorates Amyloid Burden by Increasing Microglial Phagocytosis and Modulation of Amyloid Precursor Protein Processing

Kummer, M. P., Vogl, T., Axt, D., Griep, A., Vieira-Saecker, A., Jessen, F., Gelpi, E., Roth, J., Heneka, M. T.

Journal:

Journal of Neuroscience

Year:

2012

Language:

english

File:

PDF, 1.75 MB

english, 2012

30

Rapid-Quench Mixing and Use of Fast Footprinting to Characterize DNA Opening in the Late Steps of Open Complex Formation at λPR by E. coli RNA Polymerase

Gries, Theodore J., Kontur, Wayne S., Capp, Michael W., Davis, Caroline A., Drennan, Amanda C., Saecker, Ruth M., Record, M. Thomas

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 73 KB

english, 2009

31

Thermodynamics of Interactions between Histone-like Proteins from Escherichia coli (HU and IHF) and Intact Duplex DNA

Koh, Junseock, Saecker, Ruth M., Record, M. Thomas

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 43 KB

english, 2009

32

Probing DNA Binding, DNA Opening and Assembly of a Downstream Clamp During Transcription Initiation by E. coli RNA Polymerase at the λPR Promoter

Drennan, Amanda, Gries, Theodore, Heitkamp, Sara, Ruff, Emily, Saecker, Ruth, Record, M. Thomas

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 38 KB

english, 2011

33

Periodic Table Presentations and Inspirations

Saecker, Mary E.

Journal:

Journal of Chemical Education

Year:

2009

Language:

english

File:

PDF, 972 KB

english, 2009

34

Molecular Beam Scattering from Liquid Surfaces

SAECKER, M. E., GOVONI, S. T., KOWALSKI, D. V., KING, M. E., NATHANSON, G. M.

Journal:

Year:

1991

Language:

english

File:

PDF, 528 KB

english, 1991

35

[Methods in Enzymology] RNA Polymerases and Associated Factors, Part C Volume 370 || Rapid Quench Mixing to Quantify Kinetics of Steps in Association of Escherichia coli RNA Polymerase with Promoter DNA

Saecker, Ruth M.

Year:

2003

Language:

english

File:

PDF, 126 KB

english, 2003

36

E. Coli RNA Polymerase: A Molecular DNA Opening Machine

Drennan, Amanda, Saecker, Ruth, Heitkamp, Sara, Capp, Michael, Kraemer, Mark, Bellissimo, Dana, Gries, Theodore, Ruff, Emily, Sheppard, Carol, Wigneshweraraj, Siva, Artsimovitch, Irina, Record, M. Tho

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 40 KB

english, 2012

37

Use of Fast DNA Footprinting and Real-Time Fluorescence Spectroscopy to Characterize Novel, Biologically Revlevant Transcription Initiation Intermediates for E. Coli RNA Polymerase

Heitkamp, Sara, Lingeman, Emily, Capp, Mike, Saecker, Ruth, Record, M. Thomas

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 40 KB

english, 2012

38

Professor Gallium

Saecker, Mary E.

Journal:

Journal of Chemical Education

Year:

2009

Language:

english

File:

PDF, 118 KB

english, 2009

39

Synthesis-Mediated Release of a Small RNA Inhibitor of RNA Polymerase

Wassarman, K. M., Saecker, R. M.

Journal:

Year:

2006

Language:

english

File:

PDF, 215 KB

english, 2006

40

Trinucleotide expansion within the MJD1 gene presents clinically as spinocerebellar ataxia and occurs most frequently in German SCA patients

Schöls, Ludger, Vieira-Saecker, Ana Maria Menezes, Schöls, Stephan, Przuntek, Horst, Epplen, Jörg T., Riess, Olaf

Journal:

Human Molecular Genetics

Year:

1995

Language:

english

File:

PDF, 401 KB

english, 1995

41

Marie Curie in JCE Resources and Modern Media

Saecker, Mary E.

Journal:

Journal of Chemical Education

Year:

2011

Language:

english

File:

PDF, 3.83 MB

english, 2011

42

Solute Probes of Conformational Changes in Open Complex (RP o ) Formation by Escherichia coli RNA Polymerase at the λP R Promoter: Evidence for Unmasking of the Active Site in the Isomerization Step and for Large-Scale Coupled Folding in the Subsequent Conversion to RP o†

Kontur, Wayne S., Saecker, Ruth M., Davis, Caroline A., Capp, Michael W., Record, M. Thomas

Journal:

Year:

2006

Language:

english

File:

PDF, 510 KB

english, 2006

43

Use of Urea and Glycine Betaine To Quantify Coupled Folding and Probe the Burial of DNA Phosphates in Lac Repressor−Lac Operator Binding †

Hong, Jiang, Capp, Mike W., Saecker, Ruth M., Record, M. Thomas

Journal:

Year:

2005

Language:

english

File:

PDF, 383 KB

english, 2005

44

Interactions of the Osmolyte Glycine Betaine with Molecular Surfaces in Water: Thermodynamics, Structural Interpretation, and Prediction of m -Values

Capp, Michael W., Pegram, Laurel M., Saecker, Ruth M., Kratz, Megan, Riccardi, Demian, Wendorff, Timothy, Cannon, Jonathan G., Record, M. Thomas

Journal:

Year:

2009

Language:

english

File:

PDF, 1.21 MB

english, 2009

45

Enthalpy and Heat Capacity Changes for Formation of an Oligomeric DNA Duplex: Interpretation in Terms of Coupled Processes of Formation and Association of Single-Stranded Helices †

Holbrook, Jill A., Capp, Michael W., Saecker, Ruth M., Record, M. Thomas

Journal:

Year:

1999

Language:

english

File:

PDF, 141 KB

english, 1999

46

Probing DNA Binding, DNA Opening, and Assembly of a Downstream Clamp/Jaw in Escherichia coli RNA Polymerase−λP R Promoter Complexes Using Salt and the Physiological Anion Glutamate

Kontur, Wayne S., Capp, Michael W., Gries, Theodore J., Saecker, Ruth M., Record, M. Thomas

Journal:

Year:

2010

Language:

english

File:

PDF, 1.78 MB

english, 2010

47

One-step DNA melting in the RNA polymerase cleft opens the initiation bubble to form an unstable open complex

Gries, T. J., Kontur, W. S., Capp, M. W., Saecker, R. M., Record, M. T.

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.03 MB

english, 2010

48

Load-aware inter-co-processor parallelism in database query processing

Breß, Sebastian, Siegmund, Norbert, Heimel, Max, Saecker, Michael, Lauer, Tobias, Bellatreche, Ladjel, Saake, Gunter

Journal:

Data & Knowledge Engineering

Year:

2014

Language:

english

File:

PDF, 1.63 MB

english, 2014

49

The thermal roughening of liquid surfaces and its effect on gas–liquid collisions

King, Mackenzie E., Saecker, Mary E., Nathanson, Gilbert M.

Journal:

The Journal of Chemical Physics

Year:

1994

Language:

english

File:

PDF, 920 KB

english, 1994

50

Collisions of protic and aprotic gases with a perfluorinated liquid

Saecker, Mary E., Nathanson, Gilbert M.

Journal:

The Journal of Chemical Physics

Year:

1994

Language:

english

File:

PDF, 825 KB

english, 1994